DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vnd and NKX2-4

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_149416.1 Gene:NKX2-4 / 644524 HGNCID:7837 Length:354 Species:Homo sapiens


Alignment Length:413 Identity:135/413 - (32%)
Similarity:173/413 - (41%) Gaps:135/413 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 HTSPSALSPTPAGVSADEHHNGSGTGGGAGE---ADHHSTTEHHAPPSHPQQQHPHHQQHHHPHL 309
            ||:|.::|...:.:. :.:...||...||..   |...:...:.|||..|..|            
Human     7 HTTPFSVSDILSPIE-ETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQ------------ 58

  Fly   310 LLPQQHHQQAVAPLPLAHHQSGEAQSHAHANAAAAHLLASHNAAAAAAVAAGQYLPNLPKNFPGS 374
                   ...||.:..:|..:|    |..|.||||       ||||||.||..::|      || 
Human    59 -------AATVAGMQPSHAMAG----HNAAAAAAA-------AAAAAAAAATYHMP------PG- 98

  Fly   375 FGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQPASPDSTSPVTSEVSYTYIGSNCQTSPALS 439
                :|.:.|.|                                         :||.|.......
Human    99 ----VSQFPHGA-----------------------------------------MGSYCNGGLGNM 118

  Fly   440 GDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKAEGINGA 504
            |:..:|:                      :|..|||.|.....|.:...::.:.....:.|:|.|
Human   119 GELPAYT----------------------DGMRGGAATGWYGANPDPRYSSISRFMGPSAGVNVA 161

  Fly   505 GSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRY 569
            |.|   ||.  ||      .|.|...|...|..:...|  :|||||||::||.|||||||:||:|
Human   162 GMG---SLT--GI------ADAAKSLGPLHAAAAAAAP--RRKRRVLFSQAQVYELERRFKQQKY 213

  Fly   570 LSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKG-----YEGHPGLLHGHATHPHHPSAL 629
            |||||||||||:|.||||||||||||||||.||...:|.     .||      |....|..|   
Human   214 LSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQEG------GLGPPPPPP--- 269

  Fly   630 PSPRRVAVPVLVRNGKPCLGDSS 652
            ||||||||||||::||||...:|
Human   270 PSPRRVAVPVLVKDGKPCQNGAS 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 47/55 (85%)
NKX2-4NP_149416.1 Homeodomain 190..246 CDD:459649 47/55 (85%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..329 24/56 (43%)

Return to query results.
Submit another query.