Protein Alignment vnd and nkx2.4b

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_571664.1
• Gene: nkx2.4b / 58112
• ZFINID: ZDB-GENE-000830-1
• Length: 307
• Species: Danio rerio
• Alignment Length: 265
• Identity: 88/265 - (33%)
• Similarity: 114/265 - (43%)
• Gaps: 91/265 - (34%)

  Fly   421 SEVSYTYIGSNCQTSPALSGDYKSYSRSADSDALSVG----------DALHTLHGSSGNGSAGGA 475
            |:.|::.:|..|..:....||..||..|..:.|.:..          ..:....|.|...:.|..
Zfish    66 SQFSHSTMGGYCNGTIGAMGDLPSYQESMRNGATATAWYGSNPEPRYPTISRFMGPSAGMNMGTL 130

  Fly   476 PTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGS-- 538
            |                                                       |.||:.|
Zfish   131 P-------------------------------------------------------GMDASKSMV 140

  Fly   539 --DGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTK 601
              ...|  :|||||||::||.|||||||:||:||||||||||||:|.||||||||||||||||.|
Zfish   141 TLHAAP--RRKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMK 203

  Fly   602 RAQNEKGYEGHPGLLHGHATHPHHPSALPSPRRVAVPVLVRNGKPCLGDS-----------SKLG 655
            |...:|..:....         .:..|..||||||:||||::||||...|           |.||
Zfish   204 RQAKDKASQQQDS---------GNMCAQQSPRRVALPVLVKDGKPCQNGSGTPTPIHQQVQSVLG 259

  Fly   656 ADCVS 660
            ::.::
Zfish   260 SETLA 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	47/55 (85%)
nkx2.4b	NP_571664.1	Homeodomain	148..204	CDD:459649	47/55 (85%)