Protein Alignment vnd and hoxa4a

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_571610.1
• Gene: hoxa4a / 58050
• ZFINID: ZDB-GENE-000823-4
• Length: 245
• Species: Danio rerio
• Alignment Length: 181
• Identity: 46/181 - (25%)
• Similarity: 71/181 - (39%)
• Gaps: 50/181 - (27%)

  Fly   482 HNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGI----------------EEDIDDVDDADGS 530
            |....:.:.|:...|..|...|:....|.||..|.:                :..::.|
Zfish    80 HAQPQSVSQNHGPRLTTESCVGSDGNKDCSLVSDALPGSQKSKEPVVYPWMKKVHVNTV------ 138

  Fly   531 GGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQN 595
               .|:.|.|:|   ::.|..:|:.|..|||:.|...|||:...|..:|..:.|:..||||||||
Zfish   139 ---TASYSGGVP---KRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQN 197

  Fly   596 HRYKTK---RAQNEKGYEGHPGLLHGHATHP--HH---------PSALPSP 632
            .|.|.|   :..|.|        :...::.|  ||         .:.||:|
Zfish   198 RRMKWKKDHKLPNTK--------IRSSSSAPSNHHVKTDATQQQQTLLPTP 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	24/58 (41%)
hoxa4a	NP_571610.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	34..99		4/18 (22%)
		Antp-type hexapeptide	126..131		0/4 (0%)
		Homeodomain	148..204	CDD:459649	23/55 (42%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	205..245		8/44 (18%)