Protein Alignment vnd and hoxa9a

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_571607.2
• Gene: hoxa9a / 58047
• ZFINID: ZDB-GENE-000823-1
• Length: 250
• Species: Danio rerio
• Alignment Length: 287
• Identity: 68/287 - (23%)
• Similarity: 102/287 - (35%)
• Gaps: 85/287 - (29%)

  Fly   354 AAAAVAAGQYLPNLPKNFPGS----FGDEMSSYHHMAQTM---LQHSGRSAWIKENELYGTQQ-- 409
            :.:....|.|:.::.  .|||    |...:....|....:   |...|...:..:..:|||..
Zfish     2 STSGALTGYYVDSIV--IPGSEETRFSSGLGLIQHRPTILPADLSDLGPCTFPAKQPVYGTSDWG 64

  Fly   410 ----------PA--SPDSTSPVTSE-VSYTYIGSNC---QTSPALSGDYKSYSRSADSDALSVGD 458
                      |:  .|.:..||..: |....:.|.|   ||.|
Zfish    65 HIPTHFSTGVPSVYQPHAQPPVVGDYVQSWLLDSACGLPQTEP---------------------- 107

  Fly   459 ALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNN--------HSLKAEGI--NGAGSGHDDSLN 513
                             ||.:  ||:..:.||..|        |::....:  ||..|...::.:
Zfish   108 -----------------PTVN--HNHAKSDTNETNDDGTEYSPHTILQPEVFTNGGCSTKTEAES 153

  Fly   514 EDGIEEDIDDVDDADGSGGGDANG--SDGL-PNKKRKRRVLFTKAQTYELERRFRQQRYLSAPER 575
            ....|:.    .|.:|..|.|...  |:.| .:..||:|..:||.|..|||:.|....||:...|
Zfish   154 SRTAEKS----GDIEGKPGADPENPVSNWLHASSTRKKRCPYTKHQILELEKEFLFNTYLTRDRR 214

  Fly   576 EHLASLIRLTPTQVKIWFQNHRYKTKR 602
            ..:|.|:.||..||||||||.|.|.|:
Zfish   215 YEVARLLNLTERQVKIWFQNRRMKMKK 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	27/55 (49%)
hoxa9a	NP_571607.2	Hox9_act	1..171	CDD:461369	37/215 (17%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	105..177		18/116 (16%)
		Homeodomain	185..241	CDD:459649	27/55 (49%)