Protein Alignment vnd and nkx2.4a

DIOPT Version :9

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001104636.1
• Gene: nkx2.4a / 562300
• ZFINID: ZDB-GENE-030131-6336
• Length: 345
• Species: Danio rerio
• Alignment Length: 355
• Identity: 112/355 - (31%)
• Similarity: 160/355 - (45%)
• Gaps: 93/355 - (26%)

  Fly   373 GSFGDEMSSYH--HMAQT-MLQHS-GRSAWIKENELYGTQQPASPDSTSPVTSEVSYTYIGSNCQ 433
            |:....:.:|.  .::|| |.||| |.:|.:...    ...|.|       .|:.|::.:|..|.
Zfish    34 GNLTSPLGAYRQPQVSQTGMQQHSMGHNATVATT----YHMPHS-------VSQFSHSAMGGYCN 87

  Fly   434 TSPALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKA 498
            .|.|..||..||..:..:.|.:.|     .:|::.:      |....:......:|
Zfish    88 GSIANMGDLPSYQETMRNSAAATG-----WYGANPD------PRYSTISRFMGPST--------- 132

  Fly   499 EGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLP----NKKRKRRVLFTKAQTYE 559
             |:|..|.|   :|.                   |.|:.:..:|    ..:|||||||::||..|
Zfish   133 -GMNMTGMG---TLT-------------------GMADTTKSIPPLHAAPRRKRRVLFSQAQVCE 174

  Fly   560 LERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKG-----YEGHPGLLHGH 619
            |||||:||:||||||||||||:|.||||||||||||||||.||...:|.     .||:  |....
Zfish   175 LERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQEGN--LCQQQ 237

  Fly   620 ATHPHHPSALPSPRRVAVPVLVRNGKPCLGDSS------------KLGADCVSVSSATATAMQNA 672
                      .|||||||||||::||||...|:            :.|...|..:|  :.:|...
Zfish   238 ----------QSPRRVAVPVLVKDGKPCQNGSNTPTPNQQQMQQQQNGGGVVLPTS--SNSMNQH 290

  Fly   673 AAHHLVALNGAAAYQHAAAAAAGLHAHAHA 702
            .:..:.||..|...:..:.:...||:..::
Zfish   291 QSQQVNALVQAQDLEEMSPSPPSLHSQMNS 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeobox	548..601	CDD:278475	44/52 (85%)
nkx2.4a	NP_001104636.1	Homeobox	163..216	CDD:278475	44/52 (85%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0842
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X524
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.810