DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and BARX1

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_067545.3 Gene:BARX1 / 56033 HGNCID:955 Length:254 Species:Homo sapiens


Alignment Length:295 Identity:71/295 - (24%)
Similarity:99/295 - (33%) Gaps:124/295 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 AAAAAAVAAGQYLPNLPKNFPGSFGDEMSSYHHMAQTMLQ----HSGRSAWIKENELYGTQQPAS 412
            |.||||.|||:.|         .||         .|.:|.    || ..|.:|..:....:.|.:
Human    45 APAAAAAAAGELL---------KFG---------VQALLAARPFHS-HLAVLKAEQAAVFKFPLA 90

  Fly   413 PDSTSPVTSEVSYTYIGSNCQTSPALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAPT 477
            |...|.::|.:        ....|.|.|                               |.||| 
Human    91 PLGCSGLSSAL--------LAAGPGLPG-------------------------------AAGAP- 115

  Fly   478 AHALHNNNNNTTNNNNH---SLKAEG-INGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGS 538
                            |   .|:..| :..||.|      |.|.:                    
Human   116 ----------------HLPLELQLRGKLEAAGPG------EPGTK-------------------- 138

  Fly   539 DGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRA 603
               ..|.|:.|.:||:.|...||:||.:|:|||.|:|..||..:.|:..|||.|:||.|.|.|:.
Human   139 ---AKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKI 200

  Fly   604 QNEKGYEGHPGLLHGHATHPHHPSALPSPRRVAVP 638
            ..:.|     ||     ..|..|..  .|::.::|
Human   201 VLQGG-----GL-----ESPTKPKG--RPKKNSIP 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 26/55 (47%)
BARX1NP_067545.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Homeodomain 143..199 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..254 7/32 (22%)
Blue background indicates that the domain is not in the aligned region.

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