Protein Alignment vnd and barhl1a

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001017712.3
• Gene: barhl1a / 550407
• ZFINID: ZDB-GENE-050417-212
• Length: 299
• Species: Danio rerio
• Alignment Length: 345
• Identity: 85/345 - (24%)
• Similarity: 119/345 - (34%)
• Gaps: 127/345 - (36%)

  Fly   374 SFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQPASPDSTSPVTSEVSYTYIGSNCQTSPAL 438
            |||.|         ::|.|...|..:.:.|.      .||...||.:.      :.|.|.:.|
Zfish     8 SFGIE---------SILSHRASSPCMSKGEC------RSPAELSPRSD------LDSGCSSPP-- 49

  Fly   439 SGDYKSYSRSADSDA-------------LSVGDALHTL---------------------HGSSGN 469
                 |..||:..||             |.:.....|:                     :.|:|.
Zfish    50 -----SPRRSSVEDAVHRRARALGLDSPLQISQQPRTVTSSFLIRDILADCKPLAACAPYSSTGQ 109

  Fly   470 GSAGGAPTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGD 534
            .:.........||:|:::                      ||      |..:.|..|.:.|...|
Zfish   110 SAQDAEDCMDKLHSNSSS----------------------DS------EYRVKDEADREISSSRD 146

  Fly   535 ANGSDGLPN----KKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQN 595
            :      ||    |.||.|..||..|..:|||.|.:|:|||..:|..||:.:.||.||||.|:||
Zfish   147 S------PNSRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQN 205

  Fly   596 HRYKTKRAQNEKGYE-----GHPGLLHGHATHPHH--------------------PSALPSP-RR 634
            .|.|.|| |...|.|     |:...|......|:.                    |||.|.| :|
Zfish   206 RRTKWKR-QTAVGLELLAEAGNYSALQRMFPSPYFYPQSLVSNLDPGPGLYLYRGPSAPPPPVQR 269

  Fly   635 VAVPVLVRNGKPCLGDSSKL 654
            ..||.::.:|....||.:.|
Zfish   270 PLVPRILLHGLQGGGDPASL 289

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	28/55 (51%)
barhl1a	NP_001017712.3	None