Protein Alignment vnd and nkx3.3

DIOPT Version :9

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001013342.2
• Gene: nkx3.3 / 503746
• ZFINID: ZDB-GENE-050306-27
• Length: 240
• Species: Danio rerio
• Alignment Length: 218
• Identity: 78/218 - (35%)
• Similarity: 98/218 - (44%)
• Gaps: 42/218 - (19%)

  Fly   429 GSNCQTSPALSGDYKSYSRSADSDALSVGDALHTLHGSS--GNGSAGGAPTAHALHNNNNNTTNN 491
            |..|..:.:...:|:...|:.||             |||  .|..|..|.|..:.......:.::
Zfish    17 GHECGKNGSFDEEYEGEKRTQDS-------------GSSVPVNRGAESAQTRISSCVLVLESLSS 68

  Fly   492 NNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKKRKR-RVLFTKA 555
            :.||.:.|     .:|.|:||......|       .|.......:..|..|...:|| |..|:.|
Zfish    69 DQHSCEEE-----STGEDNSLERRHDHE-------MDQQKPQSCSFEDSNPKSSKKRSRAAFSHA 121

  Fly   556 QTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGLLHGHA 620
            |.|||||||..|||||.|||..||..::||.|||||||||.||||||.|          :....|
Zfish   122 QVYELERRFNLQRYLSGPERADLAGALKLTETQVKIWFQNRRYKTKRRQ----------MAAELA 176

  Fly   621 THPHHPSALPSPRRVAVPVLVRN 643
            |.|....|    :||||.|||||
Zfish   177 TTPTTTLA----KRVAVKVLVRN 195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeobox	548..601	CDD:278475	36/53 (68%)
nkx3.3	NP_001013342.2	Homeobox	114..167	CDD:278475	35/52 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0842
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810