DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and NKX3-1

DIOPT Version :9

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_006158.2 Gene:NKX3-1 / 4824 HGNCID:7838 Length:234 Species:Homo sapiens


Alignment Length:177 Identity:64/177 - (36%)
Similarity:85/177 - (48%) Gaps:35/177 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   500 GINGAGSGHDD-SLNEDGIEEDIDDVDDAD-----GSGGGDANGSDG-------LPNKKRKR-RV 550
            |.:.||:.:|. |.......|:.:.:.:.:     ||...|:..:.|       .|.:.:|| |.
Human    65 GRSRAGAQNDQLSTGPRAAPEEAETLAETEPERHLGSYLLDSENTSGALPRLPQTPKQPQKRSRA 129

  Fly   551 LFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGL 615
            .|:..|..||||:|..|:|||||||.|||..::||.|||||||||.||||||.|    .....|.
Human   130 AFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQ----LSSELGD 190

  Fly   616 LHGHATHPHHPSALPSPRRVAVP----VLVRNGKP------CLGDSS 652
            |..|       |:||:.:..|..    |.|.|..|      |:|..|
Human   191 LEKH-------SSLPALKEEAFSRASLVSVYNSYPYYPYLYCVGSWS 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeobox 548..601 CDD:278475 34/53 (64%)
NKX3-1NP_006158.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..131 14/65 (22%)
Homeobox 127..180 CDD:278475 33/52 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0842
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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