Protein Alignment vnd and Abd-B

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Alignment Length: 500
• Identity: 121/500 - (24%)
• Similarity: 173/500 - (34%)
• Gaps: 159/500 - (31%)

  Fly   224 AHH------GSDLSHHSASESTSGHRGQGSHTSPSALSPTPAGVSADEHHNGSGTGGGAGEADHH 282
            |||      .:...||||.......:.|..|   :.::.:|:.|...:....:.|        .|
  Fly    35 AHHHLPQPLHTTSHHHSAHPHLQQQQQQQQH---AVVASSPSSVLQQQQQQSTPT--------TH 88

  Fly   283 STTEH----HAPPSHP----QQQH---PHHQQHHHPHLLLPQQHHQQAVAPLPLA---------- 326
            ||..|    ..||..|    ||||   |..||    .|...||..||.:|..|:|
  Fly    89 STPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQ----QLQQQQQQQQQQLATTPVAGALSPAQTPT 149

  Fly   327 -------------HHQSGEAQSHAHANAA-AAHLLASHNAAAAAAVAAGQ---YLPNLPKNFPGS 374
                         |||....|...::.|: |:..|........||||.||   ..|......|.|
  Fly   150 GPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSS 214

  Fly   375 FGDEMSSYHHMAQ---------------------TMLQHSGRSAWIKE--NELYGT--------- 407
            ...:....:...|                     .:.:|:...|:..|  |:.||:
  Fly   215 VSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMF 279

  Fly   408 QQPASPDSTSPVTSEVSYTYIGSNCQ----TSPALSGDYKSYSRSADSDALSVGDALHTLHGSSG 468
            ..| .|::..||..     |.|.|.:    ||.|.:..|.:.:....|.|     |..::.|:|
  Fly   280 AYP-YPETQFPVGQ-----YWGPNYRPDQTTSAAAAAAYMNEAERHVSAA-----ARQSVEGTS- 332

  Fly   469 NGSAGGAPTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGG 533
              ::...|..::                ...|:.|..|.:..|                .|:.||
  Fly   333 --TSSYEPPTYS----------------SPGGLRGYPSENYSS----------------SGASGG 363

  Fly   534 DANGSDG--LPN----------KKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTP 586
            .:.|:.|  .||          ..||:|..::|.||.|||:.|....|:|..:|..||..::||.
  Fly   364 LSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTE 428

  Fly   587 TQVKIWFQNHRYKTK----RAQNEKGYEGHPGLLHGH--ATHPHH 625
            .||||||||.|.|.|    |..|::....:....|.|  ||..||
  Fly   429 RQVKIWFQNRRMKNKKNSQRQANQQNNNNNSSSNHNHAQATQQHH 473

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	28/59 (47%)
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	27/55 (49%)