DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and meox1

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_001002450.2 Gene:meox1 / 436723 ZFINID:ZDB-GENE-040718-149 Length:253 Species:Danio rerio


Alignment Length:321 Identity:76/321 - (23%)
Similarity:98/321 - (30%) Gaps:107/321 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 QHHQQAVAPLPLAHHQSGEAQSHAHANAAAAHLLASHNAAAAAAVAAGQYLPNLPKNFPGSFGDE 378
            |.:|||    |.|.||..:             .||..:.:::..|.|....|...:.:|.:    
Zfish    35 QPYQQA----PFALHQKHD-------------FLAYTDFSSSCLVPAPHAYPREDRLYPET---- 78

  Fly   379 MSSYHHMAQTMLQHSG--RSAW-IKENELYGTQQPASPDSTSPVTSEVSYTYIGSNCQTSPALSG 440
                         |||  |:.| ....|..|..|.....:...|.:|:.                
Zfish    79 -------------HSGYQRTEWQFSPCEPRGRGQEPCQGAAEAVGAEMD---------------- 114

  Fly   441 DYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKAEGINGAG 505
                   ||..|.|: |.....|.|.....|.....|...........|:..:.|.||       
Zfish   115 -------SAGGDRLA-GAVTGCLEGDYSPQSVPAVDTEKKSSKRKREVTDIQDSSFKA------- 164

  Fly   506 SGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYL 570
                                        |:|      .|.||.|..|||.|..|||..|....||
Zfish   165 ----------------------------DSN------CKARKERTAFTKEQLRELEAEFTHHNYL 195

  Fly   571 SAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGLLHGHATHPHHPSALPS 631
            :...|..:|..:.||..|||:||||.|.|.||.   ||  |.|...|.........:|.||
Zfish   196 TRLRRYEIAVNLDLTERQVKVWFQNRRMKWKRV---KG--GQPASPHDLEADELDSAASPS 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 26/55 (47%)
meox1NP_001002450.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 136..158 3/21 (14%)
Homeodomain 171..227 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..253 10/31 (32%)

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