Protein Alignment vnd and HHEX

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Alignment Length: 482
• Identity: 108/482 - (22%)
• Similarity: 142/482 - (29%)
• Gaps: 216/482 - (44%)

  Fly   195 SQRSGFHISDIL----------NLEGSELKNAAAAAAAAAHHGSDLSHHSASESTSGHRGQGSHT 249
            |.::.|.|.:||          :..||.....|..|..|..|.  |:...||.:|      ||
  Fly     7 SSKAAFSIENILEQKSSSHRSQSRRGSSQSPVAVTAGIATPHA--LAMPKASLAT------GS-- 61

  Fly   250 SPSALSPTPAGVSADEHHNGSGTGGGAGEA----DHHST---TEHHAPPSHPQQQHPHHQQ---- 303
              |:.:|||:..||...::.|.....|..|    |..:.   |.....|.:|......:||
  Fly    62 --SSAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQVLQL 124

  Fly   304 HHHPHLLLPQQHHQQAVAPLPLAHHQSGEAQSHAHANAAAAHLLASHNAAAAAAVAAGQYLPNLP 368
            ..:|.|.:|              |.|                      |||.||.||.|
  Fly   125 QKNPSLFMP--------------HFQ----------------------AAAVAAAAAVQ------ 147

  Fly   369 KNFPGSFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQPASPDSTSPVTSEVSYTYIGSNCQ 433
               |.::.|:.|.:     ||             :..|...|||       .:...|      |.
  Fly   148 ---PTAYCDQYSPF-----TM-------------DCEGFPNPAS-------AAAALY------CN 178

  Fly   434 TSPALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKA 498
            ..||.| .|.|                                                |..:|.
  Fly   179 AYPAAS-FYMS------------------------------------------------NFGVKR 194

  Fly   499 EGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKKRKRRVLFTKAQTYELERR 563
            :|                                               .::.||..||..||.|
  Fly   195 KG-----------------------------------------------GQIRFTSQQTKNLEAR 212

  Fly   564 FRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGLLHGHATHPHHPSA 628
            |...:|||..||.|||..::||..|||.||||.|.|.:||...|......|.:.|.|.  ..||:
  Fly   213 FASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQGPIAGAAV--GSPSS 275

  Fly   629 LPSPRRVAVPVLVRNGKPCLGDSSKLG 655
            ..|.   :||||      .||..|:.|
  Fly   276 ASSS---SVPVL------NLGSGSRCG 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	27/55 (49%)
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	27/50 (54%)