Protein Alignment vnd and pb

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Alignment Length: 239
• Identity: 60/239 - (25%)
• Similarity: 86/239 - (35%)
• Gaps: 85/239 - (35%)

  Fly   406 GTQQPASPDSTSPVTSEVSYTYIGSNCQTSPALSGDYKSYSRSAD-------------SDALSVG 457
            |..|...|    ||.|.:....:..||.            .||||             :...|:.
  Fly    60 GIGQQGVP----PVPSVLMVNKMTPNCD------------KRSADTAYWMTASEGGFINSQPSMA 108

  Fly   458 DALHTLHGSS-------GNGSAGGAPTAHALHNNNNNTTNNNNHSLKAEGIN-----GAGSGHD- 509
            :.|:.|...|       |:|:.||.                        |:|     |.|.|:.
  Fly   109 EFLNHLSPESPKIGTPVGSGAIGGV------------------------GVNVNVNVGVGVGYPV 149

  Fly   510 ----------DSLNE-DGIEEDIDDVDDADGSGGGDAN-----GSDGLPNKKRKRRVLFTKAQTY 558
                      ||:.| ..::|.......::.:..||.:     ..:|||   |:.|..:|..|..
  Fly   150 GVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLP---RRLRTAYTNTQLL 211

  Fly   559 ELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR 602
            |||:.|...:||..|.|..:|:.:.||..|||:||||.|.|.||
  Fly   212 ELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	24/55 (44%)
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	24/55 (44%)