Protein Alignment vnd and msx2

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: XP_002936749.1
• Gene: msx2 / 394987
• XenbaseID: XB-GENE-852974
• Length: 256
• Species: Xenopus tropicalis
• Alignment Length: 186
• Identity: 58/186 - (31%)
• Similarity: 75/186 - (40%)
• Gaps: 51/186 - (27%)

  Fly   496 LKAEGINGAGS-------GHDDSLNEDGIEE-----DIDDVDDADGSGGGDANGSDGLPNK---- 544
            |:....:.|||       |..||.:..|:.:     .:...:..||:......||...|.:
 Frog    56 LRGVDASAAGSTPRHLHMGIRDSPSPPGLTKTFETSSVKSENSEDGTTWSKDGGSYSPPPRHLSP 120

  Fly   545 ----------KRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYK 599
                      .||.|..||.:|...|||:|||::|||..||...:|.:.||.|||||||||.|.|
 Frog   121 STCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAK 185

  Fly   600 TKRAQNEKGYEG---------HPGL--------------LHGHATHPHHPSALPSP 632
            .||.| |...|.         .||.              |:|.:...|.| .||.|
 Frog   186 AKRLQ-EAEIEKLKMAAKPILPPGFSIPFPINSPIQAASLYGSSYQFHRP-VLPIP 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	31/55 (56%)
msx2	XP_002936749.1	Homeodomain	132..188	CDD:459649	31/55 (56%)