DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and ventx1.2

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_988861.1 Gene:ventx1.2 / 394455 XenbaseID:XB-GENE-920868 Length:262 Species:Xenopus tropicalis


Alignment Length:161 Identity:48/161 - (29%)
Similarity:73/161 - (45%) Gaps:28/161 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   476 PTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDG 540
            |:..|||.::.:          ::..:.||| .||.....|.....:|.:....|...|.     
 Frog    78 PSLPALHRSSGS----------SDEFSPAGS-EDDGTESSGRNSQENDTEHRSKSPKSDL----- 126

  Fly   541 LPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQN 605
                :|:.|..||..|...||:.|.:||||.|.||:.||:.::|:..|||.||||.|.|.||...
 Frog   127 ----QRRLRTAFTPQQITRLEQAFNKQRYLGASERKKLATSLQLSEIQVKTWFQNRRMKLKRQIQ 187

  Fly   606 EKGYEGHPGLLHGHATHP----HHPSALPSP 632
            ::    .|.::.....:|    ::|..||.|
 Frog   188 DQ----QPSMVPPPVCYPQTFSYYPGGLPVP 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 27/55 (49%)
ventx1.2NP_988861.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..129 13/70 (19%)
Homeodomain 128..184 CDD:459649 27/55 (49%)

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