Protein Alignment vnd and exex

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_648164.1
• Gene: exex / 38884
• FlyBaseID: FBgn0041156
• Length: 525
• Species: Drosophila melanogaster
• Alignment Length: 509
• Identity: 126/509 - (24%)
• Similarity: 170/509 - (33%)
• Gaps: 166/509 - (32%)

  Fly   225 HHGSDLSH---HSASESTSGHRGQGSHTSPSALSP----TPAGVSADEHHNGSGTGG-------- 274
            ||.|.|.|   |..|...:....|||  :.|.|||    ||:..:|...|:.:.||.
  Fly    34 HHSSSLHHQRSHQRSSPPAQDYDQGS--NQSTLSPRSQITPSPPAASPTHSAATTGSPVSTYTPA 96

  Fly   275 -GAGEADHHSTTE----------------------HHAPPSHPQQ-----QHPHHQQHHHP---- 307
             ..|.|...|.||                      .|.||.||:.     ..|||..|.||
  Fly    97 LSPGGAQDSSQTESGQSSQMPLLVAPMPVGTGPPHSHPPPPHPRLYVEGFPPPHHVPHPHPALGT 161

  Fly   308 ------HLLLPQQH---HQQAVAPLPLAHHQSGEAQSHAHANAAAAHLL------ASHNAAAAAA 357
                  .|:||...   ...|.||.|::...:....||:.|..|...||      ...:....|.
  Fly   162 YPLPRLPLMLPANPPGVPSGAAAPPPVSPQPAANHLSHSGATMATTTLLPPAQSQPKKSFCIDAL 226

  Fly   358 VAAGQYLPNLPKNFPGSFGDEMSSYHHMA-QTMLQHSGRSAWIKENELYGTQQPA---------- 411
            :|..|:....|:  |....|.:::.|:.. |..|.|    |::..:......|.|
  Fly   227 LAKSQHQSGEPQ--PIIVDDRLAALHYARDQAELNH----AFVTASNAAAAAQAAASAAGGISEQ 285

  Fly   412 ---------------SPD----STSPVTSEVSYTYIGSNCQT----------------------- 434
                           |||    |.||.:|..|...|...|:.
  Fly   286 EALQRIRDSREYDSPSPDGMSRSESPTSSHRSSPPISPGCEDQQQPHGALHPQHLSMRMSDFHDE 350

  Fly   435 --------SPALSGDYKSYSRSADSDALSV-GDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTN 490
                    ||....|:..|:.......|:. |.|.|.....||....  .|..|          |
  Fly   351 FKKPIPPHSPIRPQDFPLYAGGHPYQLLAQGGSAFHRPLDPSGKPIP--IPMGH----------N 403

  Fly   491 NNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKKRKRRVLFTKA 555
            .....|:.|.:..||..|          ..|.::         .|.....:..|.|:.|..||..
  Fly   404 FMPSQLQFEFLARAGMLH----------HRIPEL---------AAYPHHAILGKTRRPRTAFTSQ 449

  Fly   556 QTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYK---TKRAQNE 606
            |..|||::|:|.:|||.|:|..:||.:.|:.|||||||||.|.|   :|:||.|
  Fly   450 QLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKKAQQE 503

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	29/58 (50%)
exex	NP_648164.1	Homeodomain	440..496	CDD:459649	29/55 (53%)