DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and vax2

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_919390.1 Gene:vax2 / 373869 ZFINID:ZDB-GENE-030904-8 Length:307 Species:Danio rerio


Alignment Length:255 Identity:66/255 - (25%)
Similarity:100/255 - (39%) Gaps:57/255 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 YIGSNCQTSPALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNN 491
            :.|||     :|..|....|:|    ...||:.......:...|::...||              
Zfish    18 HCGSN-----SLCRDRGRESKS----RTEVGNRSPVQSSTDTPGTSASTPT-------------- 59

  Fly   492 NNHSLKAEGINGAGSGHDDSLNEDGIEEDIDD---VDDADGS-------GGGDANGSDGLPNKKR 546
                      :.:..|||..|   |::.|...   |.||.|:       .|.|.       ::.:
Zfish    60 ----------SSSEDGHDKLL---GVDPDYCRRILVRDAKGTIREIVLPKGLDL-------DRPK 104

  Fly   547 KRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEG 611
            :.|..||..|.|.||..|::.:|:...||..||..:.|:.||||:||||.|.|.|:.|.:...:.
Zfish   105 RTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQTKDTDKR 169

  Fly   612 HPGLLHGHATHPHHPSALPSPRRVAVPVLVRN---GKPCLGDSSKLGADCVSVSSATATA 668
            ........|| .:....|...|.::||....|   ..|..|:.|.||:..||.||..:::
Zfish   170 SSSTSESLAT-CNILRLLEQGRLLSVPAPPPNPLLAHPHPGNGSLLGSPSVSTSSGVSSS 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 24/55 (44%)
vax2NP_919390.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 15/84 (18%)
Homeodomain 104..160 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..175 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..254 10/32 (31%)

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