Sequence 1: | NP_476786.2 | Gene: | vnd / 31003 | FlyBaseID: | FBgn0261930 | Length: | 723 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038962557.1 | Gene: | Nkx2-4 / 366213 | RGDID: | 1304985 | Length: | 353 | Species: | Rattus norvegicus |
Alignment Length: | 417 | Identity: | 131/417 - (31%) |
---|---|---|---|
Similarity: | 166/417 - (39%) | Gaps: | 154/417 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 248 HTSPSALSPTPAGVSADEHHNGS-------GTGGGAGEADHHSTTEHHAPPSHPQQQHPHHQQHH 305
Fly 306 HPHLLLPQQHHQQAVAPLPLAHHQSGEAQSHAHANAAAAHLLASHNAAAAAAVAAGQYLPNLPKN 370
Fly 371 FPGSFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQPASPDSTSPVTSEVSYTYIGSNCQTS 435
Fly 436 PALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKAEG 500
Fly 501 INGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGL-----PNKKRKRRVLFTKAQTYEL 560
Fly 561 ERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKG-----YEGHPGLLHGHA 620
Fly 621 THPHHPSALPSPRRVAVPVLVRNGKPC 647 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vnd | NP_476786.2 | Homeobox | 548..601 | CDD:278475 | 45/52 (87%) |
Nkx2-4 | XP_038962557.1 | Homeobox | 190..244 | CDD:395001 | 45/53 (85%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X524 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |