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Protein Alignment vnd and Nkx2-6
DIOPT Version :9
Sequence 1: | NP_476786.2 |
Gene: | vnd / 31003 |
FlyBaseID: | FBgn0261930 |
Length: | 723 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001121125.1 |
Gene: | Nkx2-6 / 364418 |
RGDID: | 1306149 |
Length: | 213 |
Species: | Rattus norvegicus |
Alignment Length: | 147 |
Identity: | 68/147 - (46%) |
Similarity: | 87/147 - (59%) |
Gaps: | 32/147 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 507 GHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLP---NKKRKRRVLFTKAQTYELERRFRQQR 568
|.::.:.|.|: |:...|...:..:| ..:||.||||::||...|||||:|||
Rat 20 GVENLMMEHGV-----------GNRSDDPRRAGPVPTVTRPRRKPRVLFSQAQVLALERRFKQQR 73
Fly 569 YLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYE--GHPGLLHGHATHPHHPSALPS 631
||||||||||||:::||.|||||||||.|||.||.:.::..| ||| .:
Rat 74 YLSAPEREHLASVLQLTSTQVKIWFQNRRYKCKRQRQDQTLELAGHP----------------LA 122
Fly 632 PRRVAVPVLVRNGKPCL 648
||||||||||.:.||||
Rat 123 PRRVAVPVLVLDVKPCL 139
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166336899 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0842 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.740 |
|
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