DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and BARHL2

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_064447.1 Gene:BARHL2 / 343472 HGNCID:954 Length:387 Species:Homo sapiens


Alignment Length:544 Identity:121/544 - (22%)
Similarity:161/544 - (29%) Gaps:221/544 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 LNLEGSELKNAAAAAAAAAHHGSDLSHHSASESTSGHRGQGSHTSPSALSP--TPAGVSADEHHN 268
            :.:||          |:.:..|.|....|||   ||        ||..::.  .|.|.:......
Human     1 MTMEG----------ASGSSFGIDTILSSAS---SG--------SPGMMNGDFRPLGEARTADFR 44

  Fly   269 GSGTGGGAGEADHHSTTEHHAPPSHP-----QQQHPH----HQQHHHPHLLLPQQHHQQAVAPLP 324
            ...|.....|.|...|.     ||.|     :...||    ..|||| ||     ||.|...|  
Human    45 SQATPSPCSEIDTVGTA-----PSSPISVTMEPPEPHLVADATQHHH-HL-----HHSQQPPP-- 96

  Fly   325 LAHHQSGEAQSHAHANAAAAHLLASHNAAAAAAVAAGQYLPNLPKNFPGSFGDEMSSYHHMAQTM 389
                                           .|.|..|.|..||:.                   
Human    97 -------------------------------PAAAPTQSLQPLPQQ------------------- 111

  Fly   390 LQHSGRSAWIKENELYGTQQPASPDSTSPVTSEVSYTYIGSNCQTSPALSGDYKSYSRSADSDAL 454
                              |||..|....|               ..|...|...|..|::.|..|
Human   112 ------------------QQPLPPQQPPP---------------PPPQQLGSAASAPRTSTSSFL 143

  Fly   455 SVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEE 519
             :.|.|    |.| ...|..||        .:.:.::.:|:.|.|. |.........|.::..:.
Human   144 -IKDIL----GDS-KPLAACAP--------YSTSVSSPHHTPKQES-NAVHESFRPKLEQEDSKT 193

  Fly   520 DIDDVDDADG---------SGGGDANGSDGLP----NKKRKRRVLFTKAQTYELERRFRQQRYLS 571
            .:|..:|:..         .|..:...|...|    .|.||.|..|:..|..:|||.|.:|:|||
Human   194 KLDKREDSQSDIKCHGTKEEGDREITSSRESPPVRAKKPRKARTAFSDHQLNQLERSFERQKYLS 258

  Fly   572 APEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYE-----GHPGLLHGHATHP--HHPSAL 629
            ..:|..||:.:.||.||||.|:||.|.|.|| |...|.|     |:...|......|  :|||.|
Human   259 VQDRMDLAAALNLTDTQVKTWYQNRRTKWKR-QTAVGLELLAEAGNYSALQRMFPSPYFYHPSLL 322

  Fly   630 PSPRRVAVPVLVRNGKPCLGDSSKLGADCVSVSSATATAMQNAAAHHLVALNGAAAYQHAAAAAA 694
            .                             |:.|.|                       ||||||
Human   323 G-----------------------------SMDSTT-----------------------AAAAAA 335

  Fly   695 GLHAHAHAHAHAHGHGHPHAHAQR 718
            .:::..:....|     ||...||
Human   336 AMYSSMYRTPPA-----PHPQLQR 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 27/55 (49%)
BARHL2NP_064447.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..145 50/261 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..240 16/91 (18%)
Homeodomain 233..289 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 367..387
Blue background indicates that the domain is not in the aligned region.

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