Protein Alignment vnd and H2.0

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_523488.2
• Gene: H2.0 / 33841
• FlyBaseID: FBgn0001170
• Length: 418
• Species: Drosophila melanogaster
• Alignment Length: 484
• Identity: 106/484 - (21%)
• Similarity: 150/484 - (30%)
• Gaps: 221/484 - (45%)

  Fly   193 PSSQRS------GFHISDILNLEGSE--LKNAAAAAAAAAHHGSDLS----HHSASESTSGHRGQ 245
            |:|..|      .|.:..:|..|..|  .:::::.:..:...||.|:    .|..|::.:..|..
  Fly    61 PTSATSTTKVKLSFSVDRLLGSEPEESHRQSSSSPSTKSCCDGSILACCSFPHCFSQANAESRRF 125

  Fly   246 GSHTSPSALSPTPAG----VSADEHHNGSGTGGGAGEADHHST-------TEHHAPPSHP----- 294
            |..|.|...:||.:.    |..|:...|.       ..|:.|.       ...||.|::|
  Fly   126 GHATLPPTFTPTSSHTYPFVGLDKLFPGP-------YMDYKSVLRPTPIRAAEHAAPTYPTLATN 183

  Fly   295 ------QQQHPHHQQHHHPHLLLPQQHHQQAVAPLPLAHHQSGEAQSHAHANAAAAHLLASHNAA 353
                  |.|...||||||      .|||.:                 |.|..    |....||:.
  Fly   184 ALLRFHQHQKQQHQQHHH------HQHHPK-----------------HLHQQ----HKPPPHNST 221

  Fly   354 AAAAVAAGQYLPNLPKNFPGSFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQPASPDSTSP 418
            .|:|:                    ::..|.:....|                |||
  Fly   222 TASAL--------------------LAPLHSLTSLQL----------------TQQ--------- 241

  Fly   419 VTSEVSYTYIGSNCQ-------TSPALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAP 476
                 ...::|...|       ||||                                  |..|.
  Fly   242 -----QQRFLGKTPQQLLDIAPTSPA----------------------------------AAAAA 267

  Fly   477 TAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGL 541
            |:.                      ||| .||                    |.|.|..|.|.|
  Fly   268 TSQ----------------------NGA-HGH--------------------GGGNGQGNASAG- 288

  Fly   542 PNKKRKR---RVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTK-- 601
            .|.||||   |.:|:..|...||.:|:||:|::.|:|..||:.:.||..|||:||||.|.|.:
  Fly   289 SNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHT 353

  Fly   602 RAQNEKGYEGHPGLLHGHATHPHHPSALP 630
            |...:.|.|             ..|||:|
  Fly   354 RENLKSGQE-------------KQPSAVP 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	27/60 (45%)
H2.0	NP_523488.2	Homeodomain	292..352	CDD:459649	28/59 (47%)