Protein Alignment vnd and scro

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Alignment Length: 417
• Identity: 136/417 - (32%)
• Similarity: 187/417 - (44%)
• Gaps: 104/417 - (24%)

  Fly   327 HHQSGEAQSHAHANAAAAHLLASHNAAAAAAVAAGQYLPNLPKNFPGSFGDEMSSYHHMAQTMLQ 391
            |||. :..:..:.|..:.....|  .|||||||...:              .:||.||:.....|
  Fly    55 HHQV-DTSTKLNTNETSTQNTVS--TAAAAAVAHHHH--------------NLSSIHHLQNLHSQ 102

  Fly   392 HSGRSAWIKENELYGTQQPASPDSTSPVTSEVSYTYIGSNCQTSPALSGDYKS--YSRSADSDAL 454
            |        ::.|:.:.. ::|.|.:.:.|.:..:|      ....|:|:..|  .|.|:.|...
  Fly   103 H--------QSTLFNSNH-STPFSVTDILSPIEESY------RKLELNGNPPSPFRSNSSSSSIN 152

  Fly   455 SVGD----------ALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKAE--GINGAGSG 507
            |.|.          |:.||:.|.|..:..| ||              :|.||...  .:..:.|.
  Fly   153 SPGTLTTSTMANPYAMGTLYHSPGVQTYCG-PT--------------DNLSLAGHYTDMRNSASW 202

  Fly   508 HDDSLNEDGIEEDIDDVDDADGSGG----GDANG------SDGLP-----NKKRKRRVLFTKAQT 557
            :..:.|:....  |..:..:..||.    |:.:|      ||..|     .::||||||||:||.
  Fly   203 YGSTANDPRFA--ISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQV 265

  Fly   558 YELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGLLHGHATH 622
            |||||||:|||||||||||||||||.||||||||||||||||.||...||..          |..
  Fly   266 YELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAM----------AEQ 320

  Fly   623 PHHPSALPSPRRVAVPVLVRNGKPCLGDSS-----KLGADCVSVSSATATAMQNAAAHHLVA--- 679
            ..|.....|||||||||||::||||.|::|     :.|.:..|..:.|.:|....|...:|:
  Fly   321 NQHNQPASSPRRVAVPVLVKDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNGNANSGIVSVTA 385

  Fly   680 --------LNGAAAYQHAAAAAAGLHA 698
                    :.|.|...|:...::.|.|
  Fly   386 NVSGGLNLITGDAPNSHSPDTSSSLLA 412

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	50/55 (91%)
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	50/55 (91%)