Protein Alignment vnd and hlx1

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001418073.1
• Gene: hlx1 / 327096
• ZFINID: ZDB-GENE-030131-5304
• Length: 357
• Species: Danio rerio
• Alignment Length: 268
• Identity: 64/268 - (23%)
• Similarity: 104/268 - (38%)
• Gaps: 85/268 - (31%)

  Fly   386 AQTMLQHSGRSAWIKENELYGTQQPASPDSTSPVTSEVSYTYIGSNCQTSPALSGDYKSYSRSAD 450
            :.:::.|.|..|     :::.:..|..|   ||||.:         .:..||       |.|
Zfish    52 SSSLMAHIGARA-----QVHSSGSPLRP---SPVTPD---------ARLHPA-------YLR--- 89

  Fly   451 SDALSVGDALHTLHGSSGNGSAGGAPTAHALH-------NNNNNTTNNNNHSL----------KA 498
                      |.:|.:|........||:..|.       :.:....:..:.||          :.
Zfish    90 ----------HGIHLTSRAAINAPPPTSKDLKFGIDRILSTDFEPKSKESPSLRDLTSIVSPNRQ 144

  Fly   499 EGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGS------DGLPNK------------- 544
            ..::.:.|.:..|     |:..:.:.....||.|..|..|      |..|.:
Zfish   145 SAVHVSASPYFAS-----IDPTMSETSSLMGSIGNAARQSGQHQFQDTFPGRPYAVLSKDTMPQT 204

  Fly   545 -KRKR---RVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYK---TKR 602
             ||||   |.:|:..|...||:||..|:|::.|:|:.||:::.||..|||:||||.|.|   :|.
Zfish   205 YKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKE 269

  Fly   603 AQNEKGYE 610
            ||.:|..|
Zfish   270 AQAQKDKE 277

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	27/61 (44%)
hlx1	NP_001418073.1	Homeodomain	206..266	CDD:459649	28/59 (47%)