DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and HOXD4

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_055436.2 Gene:HOXD4 / 3233 HGNCID:5138 Length:255 Species:Homo sapiens


Alignment Length:26 Identity:11/26 - (42%)
Similarity:14/26 - (53%) Gaps:1/26 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 LRRIDVKRKSSTSSNKAKDSQNRTKL 273
            |:..|..||..:...|.|| :||.||
Human    99 LQEEDKSRKDDSEREKEKD-KNREKL 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649
HOXD4NP_055436.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..127 11/26 (42%)
Antp-type hexapeptide 133..138
Homeodomain 155..211 CDD:459649
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..255
Blue background indicates that the domain is not in the aligned region.

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