DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and HOXA5

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_061975.2 Gene:HOXA5 / 3202 HGNCID:5106 Length:270 Species:Homo sapiens


Alignment Length:283 Identity:66/283 - (23%)
Similarity:104/283 - (36%) Gaps:82/283 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 GQYLPNLPKNFPGSFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQPASPDSTSPVTSEVSY 425
            |:| ||.|.....::||..|.......:...||||         ||                  |
Human    11 GRY-PNGPDYQLHNYGDHSSVSEQFRDSASMHSGR---------YG------------------Y 47

  Fly   426 TYIGSNCQTSPALSGDY------KSYSRSADSDALSVGDALHTLHGSSGN---------GSAGGA 475
            .|.|.:.....:.||.:      :||:.||.:   :..:..::...:|.:         .:...:
Human    48 GYNGMDLSVGRSGSGHFGSGERARSYAASASA---APAEPRYSQPATSTHSPQPDPLPCSAVAPS 109

  Fly   476 PTAHALHNNNNNTTNNNNHSLKA--------EGINGAGSGHDD---SLNEDGIEEDIDDVDDA-- 527
            |.:.:.|...|:.:|::..|..|        ||:..|....:|   |..:...:.:......|  
Human   110 PGSDSHHGGKNSLSNSSGASADAGSTHISSREGVGTASGAEEDAPASSEQASAQSEPSPAPPAQP 174

  Fly   528 -------------DGSGGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLA 579
                         |..||         |..|| .|..:|:.||.|||:.|...|||:...|..:|
Human   175 QIYPWMRKLHISHDNIGG---------PEGKR-ARTAYTRYQTLELEKEFHFNRYLTRRRRIEIA 229

  Fly   580 SLIRLTPTQVKIWFQNHRYKTKR 602
            ..:.|:..|:||||||.|.|.|:
Human   230 HALCLSERQIKIWFQNRRMKWKK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 24/55 (44%)
HOXA5NP_061975.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..175 15/102 (15%)
Antp-type hexapeptide 176..181 0/4 (0%)
Homeodomain 196..252 CDD:459649 25/56 (45%)

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