Protein Alignment vnd and Nkx2-3

DIOPT Version :9

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001101064.1
• Gene: Nkx2-3 / 309389
• RGDID: 1308521
• Length: 362
• Species: Rattus norvegicus
• Alignment Length: 340
• Identity: 115/340 - (33%)
• Similarity: 169/340 - (49%)
• Gaps: 73/340 - (21%)

  Fly   417 SPVTS-----------EVSYTYIGSNCQ--------TSPAL--SGDYKSYSRSADSDALSVGDA- 459
            |||||           |....:.|::.|        ::|.:  :.:...:|.:.:.|....|:.
  Rat     5 SPVTSTPFSVKDILNLEQQRHFHGAHLQAELEQHLHSAPCMLAAAEGTQFSDAGEEDEEEEGEKL 69

  Fly   460 --LHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDG-----I 517
              |::|..:.|:|.:|..|.::.             |::..:..:|.....::.::|..     :
  Rat    70 SYLNSLAAAEGHGVSGLCPQSYV-------------HTVLRDSCSGPKEQEEEVVSERSQKSCQL 121

  Fly   518 EEDIDDVDDADGSGGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLI 582
            ::.::...|...|    .:|....|..:||.||||::||.:||||||:|||||||||||||||.:
  Rat   122 KKSLEAAGDCKAS----EDGERPKPRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSL 182

  Fly   583 RLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGLLHGHATHPHHPSALPSPRRVAVPVLVRNGKPC 647
            :||.|||||||||.|||.||.:.:|..|     |..||..       |.|||||||||||:||||
  Rat   183 KLTSTQVKIWFQNRRYKCKRQRQDKSLE-----LGTHAPP-------PPPRRVAVPVLVRDGKPC 235

  Fly   648 LGDSSK-------LGADCVSVSSATATAMQNAAAHHLVALNGAAAYQHAAAAAAGLHAHAHAHAH 705
            :..|::       :||...|.:|..|....|:||        |||...||||||..::.::..|:
  Rat   236 VTPSAQAYGSPYGVGAGAYSYNSFPAYGYGNSAA--------AAAAAAAAAAAAAAYSGSYGCAY 292

  Fly   706 AHGHGHPHAHAQRAA 720
            ..|.|.....|..||
  Rat   293 PTGGGGGGGGAASAA 307

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeobox	548..601	CDD:278475	41/52 (79%)
Nkx2-3	NP_001101064.1	Homeobox	148..202	CDD:395001	41/53 (77%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	45	1.000	Domainoid score	I11893
eggNOG	1	0.900	-	-		E2759_KOG0842
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.810