DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vnd and dlx3b

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_571397.2 Gene:dlx3b / 30585 ZFINID:ZDB-GENE-980526-280 Length:269 Species:Danio rerio


Alignment Length:244 Identity:65/244 - (26%)
Similarity:94/244 - (38%) Gaps:64/244 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   403 ELYGTQ--QPASPDS-TSPVTSEVSYTYIGSNCQ--TSPALSGDYKSYSRSADSDALSVGDALHT 462
            :|.|:.  .|.|.|| |.|.:|.....|..|:.:  .||.......||.:               
Zfish    16 DLSGSMSCHPTSKDSPTLPESSATDMGYYSSHHEYYQSPPYPQQMNSYHQ--------------- 65

  Fly   463 LHGSSGNGSAGGA-PTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDD 526
             ...||.|:..|| ||......|......:.|..|:..             .:..::|:.:.   
Zfish    66 -FNLSGMGATPGAYPTKTEYPYNTYRQYGHYNRDLQTP-------------PQSAVKEEPET--- 113

  Fly   527 ADGSGGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKI 591
                   :....:|.|.|.||.|.:::..|...|:|||::.:||:.|||..||:.:.||.|||||
Zfish   114 -------EVRMVNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKI 171

  Fly   592 WFQNHRYKTKRAQNEKGYEGHPGLLHGHATHPHHPSAL--------PSP 632
            ||||.|.|.|:...           :|.....|.|:|.        |||
Zfish   172 WFQNRRSKFKKLYK-----------NGEVPLEHSPNASDSMACNSPPSP 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 28/55 (51%)
dlx3bNP_571397.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 9/24 (38%)
DLL_N 28..104 CDD:463567 21/104 (20%)
Homeodomain 126..182 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..242 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..269
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.