DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vnd and dlx2b

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_571372.1 Gene:dlx2b / 30557 ZFINID:ZDB-GENE-980526-18 Length:276 Species:Danio rerio


Alignment Length:217 Identity:63/217 - (29%)
Similarity:95/217 - (43%) Gaps:27/217 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   428 IGSNCQTSPALSGDYKSYSRSADSDALSVGDAL-HTLHGSSGNGSAGGAPTAH-ALHNNNNNTTN 490
            :||:..|:...|..:.:..:|.||..|.|.... .:...||..|...|...|. |.::.:..|..
Zfish     8 LGSDMHTNHITSSSFSTVHKSQDSPTLPVSTVTDSSFFSSSQTGHCAGTAYAQLASYSYHPGTVG 72

  Fly   491 NNNHSLKAEGINGA---------GSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKKR 546
            |.::|.||..:..|         |:....:..|...||...:|...:|.           |.|.|
Zfish    73 NVHYSPKAYDLGYASSYGAYGTYGASSSPTPTEPEKEESEPEVRMVNGK-----------PKKVR 126

  Fly   547 KRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEG 611
            |.|.:::..|...|:|||::.:||:.|||..||:.:.||.|||||||||.|.|.|:.........
Zfish   127 KPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKLWKNGEIPA 191

  Fly   612 HPGLLHGHATHPHHPSALPSPR 633
            ...:..|.:     ||:.|.|:
Zfish   192 DQQVASGDS-----PSSSPPPQ 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 28/55 (51%)
dlx2bNP_571372.1 DLL_N 29..102 CDD:463567 17/72 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 97..123 5/36 (14%)
Homeodomain 126..182 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..238 5/23 (22%)

Return to query results.
Submit another query.