Protein Alignment vnd and msx1a

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_571348.1
• Gene: msx1a / 30527
• ZFINID: ZDB-GENE-980526-312
• Length: 233
• Species: Danio rerio
• Alignment Length: 155
• Identity: 51/155 - (32%)
• Similarity: 67/155 - (43%)
• Gaps: 43/155 - (27%)

  Fly   546 RKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYE 610
            ||.|..|:.||...|||:|||::|||..||...:|.:.||.|||||||||.|.|.||.|.
Zfish   112 RKPRTPFSTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQE----- 171

  Fly   611 GHPGLLHGHATHPHHPSALPSPRRVAVPVLVRNGKPCLGDSSKLGADCVSVSSATATAMQNAAAH 675
                            :.|...:..|.|:|    .|..|.|...||...:.|         |.:|
Zfish   172 ----------------AELEKLKMAAKPLL----PPAFGISFPAGAHIPAYS---------AGSH 207

  Fly   676 HLVALNGAAAYQHAA-AAAAGLHAH 699
            ..        ::|:| .:..||:.|
Zfish   208 PF--------HRHSANVSPVGLYTH 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	31/55 (56%)
msx1a	NP_571348.1	Homeodomain	112..168	CDD:459649	31/55 (56%)