DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vnd and evx1

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_571324.2 Gene:evx1 / 30499 ZFINID:ZDB-GENE-980526-364 Length:377 Species:Danio rerio


Alignment Length:337 Identity:81/337 - (24%)
Similarity:122/337 - (36%) Gaps:114/337 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 RSAWIKENELYGTQQPASPD-----------STSPVTSEVSYTYIGSNCQTSPALSGDYKSYSRS 448
            |||  |..::..:.:|:.||           |:|...|:: |..|..:|...   |.||      
Zfish    66 RSA--KYGDVTLSSKPSLPDIDLSDIPNKDASSSDAESDL-YEEIDVSCTPE---SMDY------ 118

  Fly   449 ADSDALSVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLN 513
                             .:|.|.|.|:|                                     
Zfish   119 -----------------PNGQGLAMGSP------------------------------------- 129

  Fly   514 EDGIEEDIDDVDDADGSGGGDAN-GSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREH 577
            :.|.|..:|.:    ||..|..| |||    :.|:.|..||:.|...||:.|.::.|:|.|.|..
Zfish   130 KHGKEVGVDKI----GSVPGSLNYGSD----QMRRYRTAFTREQIARLEKEFYRENYVSRPRRCE 186

  Fly   578 LASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPG--------LLHGHATHPHHPSALPSPRR 634
            ||:.:.|..|.:|:||||.|.|.||.:....:. ||.        :.|..||     .:||.|.:
Zfish   187 LAAALNLPETTIKVWFQNRRMKDKRQRLAMTWP-HPADPAFYTYMMSHAAAT-----GSLPYPFQ 245

  Fly   635 VAVPVLVRNGKPCLGDSSKLGADCVSVSSATATAMQNAAAHHLVALNGAAAYQHAAAAAAGLHAH 699
            ..:|:      |.....|       ||::.:|||.....::.|.:|:......|.......|.|.
Zfish   246 SHLPL------PYYSPLS-------SVTAGSATATAGPFSNPLRSLDSFRVLSHPYPRPELLCAF 297

  Fly   700 AHAHAH-AHGHG 710
            .|...: :.|||
Zfish   298 RHPSLYPSPGHG 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 23/55 (42%)
evx1NP_571324.2 Homeodomain 155..211 CDD:459649 23/55 (42%)

Return to query results.
Submit another query.