Protein Alignment vnd and hoxa10b

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_571230.2
• Gene: hoxa10b / 30391
• ZFINID: ZDB-GENE-990415-97
• Length: 347
• Species: Danio rerio
• Alignment Length: 325
• Identity: 75/325 - (23%)
• Similarity: 117/325 - (36%)
• Gaps: 72/325 - (22%)

  Fly   328 HQSGEAQSHAHANAAAAHLLASHNAAAAAAVAAGQYLPNLPKNFPGSFGDEMSSYHHMAQTMLQH 392
            |...|...|.:.|:.   :.....:..:..::...|...|.:|        .|:..::..|...:
Zfish    36 HGRSEGSGHYYQNSG---VYLQPTSEYSYGLSNCGYFSGLKRN--------ESNSQNVVPTCGPY 89

  Fly   393 SGRSAWIKENELYGTQQP---ASPDSTSP-VTSEVSYTYIGSNCQTSPALSGDYKSYSRSADSDA 453
            .|...|::.:.....:||   .:|.|.|| :..|.||....|.......::.|. ||||...:..
Zfish    90 QGMETWLETSRSCRIEQPNNQITPRSFSPTIKEENSYCLYESEKCPKETITEDI-SYSRLTPNSC 153

  Fly   454 LSVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTN---NNNHSLKAEGINGAGSGHDDSLNED 515
            .|          |:.||.   .|.......:...||:   .:|.::....:....:..|.||:..
Zfish   154 PS----------SNNNGC---VPVPGYFRLSQTCTTSKGFTDNQTIPTHVVAQRSTRFDSSLSAI 205

  Fly   516 GIEEDIDDVDDAD--------------GSGG--------------------GDANGSDGLPN--- 543
            ..|...|:.|:..              ||.|                    ||:. |:...|
Zfish   206 AAEASRDESDEPPTCAPCAPGRNKELRGSTGTASSPEPPDSPEKAVTVTKAGDSK-SESTANWLT 269

  Fly   544 --KKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNE 606
              ..||:|..:||.||.|||:.|....||:...|..::..:.||..||||||||.|.|.|:...|
Zfish   270 AKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMSRE 334

  Fly   607  606
            Zfish   335  334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	26/55 (47%)
hoxa10b	NP_571230.2	Homeodomain	274..330	CDD:459649	26/55 (47%)