Protein Alignment vnd and Hmx2

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_001099773.1
• Gene: Hmx2 / 293538
• RGDID: 1565366
• Length: 273
• Species: Rattus norvegicus
• Alignment Length: 188
• Identity: 58/188 - (30%)
• Similarity: 80/188 - (42%)
• Gaps: 49/188 - (26%)

  Fly   499 EGINGAGSGHDD-----SLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNK-----KRKRRVLFT 553
            :|..|||....:     |.:....:|:.:.:..|.....|.....||...:     |:|.|.:|:
  Rat    93 KGSGGAGPAASERTPFLSPSHPDFKEEKERLLPAGSPSPGPERPRDGGAERQAGAAKKKTRTVFS 157

  Fly   554 KAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR---AQNEKGYEGHPGL 615
            ::|.|:||..|..:||||:.||..|||.::||.||||.||||.|.|.||   |:.|
  Rat   158 RSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELE--------- 213

  Fly   616 LHGHATHPHHPSA-----------------LPSPRRVAVPVLVRNGKPCLGDSSKLGA 656
                |.:..|.||                 :|.||.:|.|.      |....||.|.|
  Rat   214 ----AANMAHASAQTLVGMPLVFRDSSLLRVPVPRSLAFPA------PLYYPSSNLSA 261

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	29/55 (53%)
Hmx2	NP_001099773.1	Homeodomain	150..206	CDD:459649	29/55 (53%)