Protein Alignment vnd and ind

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Alignment Length: 314
• Identity: 84/314 - (26%)
• Similarity: 114/314 - (36%)
• Gaps: 86/314 - (27%)

  Fly   307 PHLLLPQQHHQQAVAPLPLAHHQSGEAQSHAHANAAAAHLLASHNAAAAAAVAAGQYLPNLPKNF 371
            |.|..|..:....:..|.:...|..:.|...||.||         ||||||.||.|..|::..:
  Fly    47 PMLPYPASYVGSYLFSLGIQQQQQQQQQQQQHAAAA---------AAAAAAAAALQQHPHVSSS- 101

  Fly   372 PGSFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQPASPDSTSPVTSEVSYTYIGSNCQTSP 436
            |||.      ||..||                |:.:::.:|..|          .|.|  |..||
  Fly   102 PGSL------YHPYAQ----------------LFASKRKSSGFS----------NYEG--CYPSP 132

  Fly   437 ALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAP-------------TAHALHNNNNNT 488
            .||.:..|             ..|..:|...|:...||.|             ::.|..:..||.
  Fly   133 PLSANPNS-------------QQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDYTNNF 184

  Fly   489 TNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDD-ADGSGGGDANGSDGLPNKKRKRRVLF 552
            ........|.|......|....:.:..|..|....::| ||.|               ::.|..|
  Fly   185 DEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSS---------------KRIRTAF 234

  Fly   553 TKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNE 606
            |..|..||||.|....|||...|..:|:.:||:..||||||||.|.|.|:..:|
  Fly   235 TSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQKKGGSE 288

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	26/55 (47%)
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	26/55 (47%)