DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and GBX1

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_001092304.1 Gene:GBX1 / 2636 HGNCID:4185 Length:363 Species:Homo sapiens


Alignment Length:402 Identity:111/402 - (27%)
Similarity:143/402 - (35%) Gaps:121/402 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 AGVSADEHHNGSGTGGGAGEADHHSTTEHHAPPSHPQQQHPHHQQH-----HHPHLLLPQQHHQQ 318
            ||..:....||.|.|||.|.|  .|......||. |:..|..:..:     :.| |:|||   ..
Human     4 AGGGSAPGGNGGGGGGGPGTA--FSIDSLIGPPP-PRSGHLLYTGYPMFMPYRP-LVLPQ---AL 61

  Fly   319 AVAPL-----PLAHHQS-------------GEAQSHAHANAAAAHLLAS--------HNAAAAAA 357
            |.|||     |||...|             |:|.....|...|....|.        ...|||||
Human    62 APAPLPAGLPPLAPLASFAGRLTNTFCAGLGQAVPSMVALTTALPSFAEPPDAFYGPQELAAAAA 126

  Fly   358 VAAGQYLPNLPKNFPGSFGDEMSSYHHMAQTMLQHSGR--SAWIKENELYGTQQPAS--PDSTSP 418
            .||.....|.|:  ||                    ||  ...::.:||...::..:  |....|
Human   127 AAAATAARNNPE--PG--------------------GRRPEGGLEADELLPAREKVAEPPPPPPP 169

  Fly   419 VTSEVSYTYIGSNCQTSPALSGDYKSYSRSADSDALSVGDALHTLHGSSGNG----------SAG 473
            ..||           |.|:|..:.|.||...:....|.||...:.....|:|          |:.
Human   170 HFSE-----------TFPSLPAEGKVYSSDEEKLEASAGDPAGSEQEEEGSGGDSEDDGFLDSSA 223

  Fly   474 GAPTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGS 538
            |.|.|..            ....|.:|..|.|:       |:|          |..:.|..|.| 
Human   224 GGPGALL------------GPKPKLKGSLGTGA-------EEG----------APVTAGVTAPG- 258

  Fly   539 DGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR- 602
                .|.|:||..||..|..|||:.|..::|||..||..:|..::|:..||||||||.|.|.|| 
Human   259 ----GKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRI 319

  Fly   603 -AQNEKGYEGHP 613
             |.|.....|.|
Human   320 KAGNVSSRSGEP 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 27/55 (49%)
GBX1NP_001092304.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 11/28 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..265 41/203 (20%)
Homeodomain 262..318 CDD:459649 27/55 (49%)

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