DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and NKX2-8

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_055175.2 Gene:NKX2-8 / 26257 HGNCID:16364 Length:239 Species:Homo sapiens


Alignment Length:200 Identity:95/200 - (47%)
Similarity:109/200 - (54%) Gaps:28/200 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   507 GHDDSLNEDGIEEDIDDVDD----ADGSGGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQ 567
            ||..|.:|..:|....|...    ...|.|.||       .|::||||||:||||.|||||||||
Human    49 GHYPSSDESSLETSPPDSSQRPSARPASPGSDA-------EKRKKRRVLFSKAQTLELERRFRQQ 106

  Fly   568 RYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGLLHGHATHPHHPSALPSP 632
            |||||||||.||||:|||||||||||||||||.|||: ..|....|.|......|. .|..|   
Human   107 RYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLKRAR-APGAAESPDLAASAELHA-APGLL--- 166

  Fly   633 RRVAVPVLVRNGKPCLGDSSKLGADCVSVSSATATAMQNAAAHHL---------VALNGAAAYQH 688
            |||.||||||:|:||.|..   |.:..:.::........|||..|         .||....||||
Human   167 RRVVVPVLVRDGQPCGGGG---GGEVGTAAAQEKCGAPPAAACPLPGYPAFGPGSALGLFPAYQH 228

  Fly   689 AAAAA 693
            .|:.|
Human   229 LASPA 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 49/55 (89%)
NKX2-8NP_055175.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..87 11/44 (25%)
Homeodomain 85..141 CDD:459649 49/55 (89%)

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