DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and Nkx2-9

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_032727.2 Gene:Nkx2-9 / 18094 MGIID:1270158 Length:235 Species:Mus musculus


Alignment Length:202 Identity:95/202 - (47%)
Similarity:111/202 - (54%) Gaps:35/202 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   508 HDDSLNEDGIEEDIDDVDDADGSG----GGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQR 568
            |..|.:|.|:|     ...||.|.    ..::.|||  |.|:|||||||:||||.||||||||||
Mouse    47 HYLSSDESGLE-----TSPADSSQLASLRRESPGSD--PEKRRKRRVLFSKAQTLELERRFRQQR 104

  Fly   569 YLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGLLHGHATHPHHPSAL---- 629
            ||||||||.||.|:|||||||||||||||||.||.:       .||:     |.|...:|.    
Mouse   105 YLSAPEREQLARLLRLTPTQVKIWFQNHRYKLKRGR-------APGI-----TEPSDMAASSDLH 157

  Fly   630 PSP---RRVAVPVLVRNGKPC---LGD-SSKLGADCVSVSSATATAMQNAAAHHL-VALNGAAAY 686
            .:|   |||.|||||.:..|.   .|: :|.:..|..|...|||..:....|... .||....||
Mouse   158 AAPGLLRRVVVPVLVHDRPPSNNGRGEGTSAVPQDKCSARLATACPVPGYTAFGPGSALGLFPAY 222

  Fly   687 QHAAAAA 693
            ||.|..|
Mouse   223 QHLAPPA 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 49/55 (89%)
Nkx2-9NP_032727.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..86 14/41 (34%)
Homeodomain 82..138 CDD:459649 49/55 (89%)

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