Protein Alignment vnd and mls-2

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_508815.2
• Gene: mls-2 / 180751
• WormBaseID: WBGene00003377
• Length: 341
• Species: Caenorhabditis elegans
• Alignment Length: 225
• Identity: 72/225 - (32%)
• Similarity: 107/225 - (47%)
• Gaps: 19/225 - (8%)

  Fly   474 GAPTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHD----DSLNEDGIEEDIDDVDDADGSGGGD 534
            |.|||..:|..|.:..:.|..|...|..:....|.|    ||.....:|.|.:|.||.......:
 Worm   126 GLPTAQLMHFKNMSNPDVNIQSDNGEEKDEKSEGKDGETRDSTGGSPLESDAEDDDDIGRGSDDE 190

  Fly   535 ANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYK 599
            ||.||...|:|:|.|.:|:::|..:||..|..:||||:.||.:||..:.||.|||||||||.|.|
 Worm   191 ANSSDPSQNRKKKTRTVFSRSQVSQLEMMFECKRYLSSQERSNLAQKLHLTETQVKIWFQNRRNK 255

  Fly   600 TKR-AQNEKGYEGHPGLLHGHATHPHHPSALPSPRRVAVPVLVRNGKPCLGDSSKLGADCVSVSS 663
            .|| ||.:   :.:..|    ..|..:..::|:...:..|:|..       .::..|.:..::.|
 Worm   256 FKRQAQTD---DTNISL----QMHRANVFSIPATTALTSPILTI-------PTTSAGVNMRNMIS 306

  Fly   664 ATATAMQNAAAHHLVALNGAAAYQHAAAAA 693
            :...|...|||..|.......|.|:..|:|
 Worm   307 SPMDASATAAARFLFGFGTLQAQQNLNASA 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	28/55 (51%)
mls-2	NP_508815.2	Homeodomain	202..258	CDD:459649	28/55 (51%)