DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and ceh-22

DIOPT Version :9

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_001343841.1 Gene:ceh-22 / 179485 WormBaseID:WBGene00000445 Length:379 Species:Caenorhabditis elegans


Alignment Length:523 Identity:148/523 - (28%)
Similarity:203/523 - (38%) Gaps:161/523 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 NAAAAAAAAAHHGSDLSHHSASESTSGHRGQGSHTSPSALSPTPAGVSADEHHNGSGTGGGAGEA 279
            |.:|.|||.....|..|..|.||.      .|..||        .||..::..:.:|.||.|..|
 Worm     3 NVSALAAATPSIASVSSVASPSEQ------HGLSTS--------VGVGVNDTTSRTGDGGAASSA 53

  Fly   280 DHHSTTEHHAPPSHPQQQHPHHQQHHHPHLLLPQQHHQQAVAPLPLAHHQSGEAQSHAHANAAAA 344
            ...|..        ||||                                   :||..|......
 Worm    54 SSASAA--------PQQQ-----------------------------------SQSALHNKTFHF 75

  Fly   345 HLLASHNAAAAAAVAAGQYLPNLPKNFPGSFGDEMSSYHHMAQTMLQHSGR---SAWIKENELYG 406
            ::   ||    .::....:...:.|.|   ||:...|......|:|.....   |.|        
 Worm    76 YI---HN----FSIRVIHFYSIISKKF---FGENSKSLEAKWDTLLPTDTNLQCSTW-------- 122

  Fly   407 TQQPASPDSTSPVTSEVSYTYIGSNCQTSPALSGD---YKSYSRSADSDALSVGDALHTLHGSSG 468
                  |||. |:.:...|:       .:|..|.|   |.||..||...:..:..:::||     
 Worm   123 ------PDSI-PLLAVSGYS-------ATPTFSFDPCTYGSYDPSAYFASNGIAGSMYTL----- 168

  Fly   469 NGSAGGAPTAHALHNN---NNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGS 530
                   |.......|   :|:.|:|.|.|.| :||.        ..:||.|.||.::.::.||:
 Worm   169 -------PDQFPRSENDMLDNSNTSNGNKSDK-DGIK--------LEDEDEILEDEENDEEDDGT 217

  Fly   531 GGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQN 595
            |          ..||||||||||||||||||||||.|:||||||||.||..||||||||||||||
 Worm   218 G----------KRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKIWFQN 272

  Fly   596 HRYKTKRAQNEKGYEG-----HPGLLHGHATHPHHPSALPSPRRVAVPVLVRNGKPCLGDSSKLG 655
            ||||||::..:|....     .|......:|....|:     |.:.:|:|||:......|.|...
 Worm   273 HRYKTKKSHTDKPINAALLTTMPNAFSSQSTAASFPT-----RAMPIPMLVRDSSARSSDISSTS 332

  Fly   656 ADCVSVSSATATAMQNAAAHHLVALNGAAAYQHAAAAAAGLHAHAHAHAHAHGHGHPHAHAQRAA 720
            ...|:..||.:..:...:| :|.|.:|  .:.:..:||:                   ::.....
 Worm   333 PYTVAFGSANSGYLPTPSA-YLPATSG--YFSNGPSAAS-------------------SYMTNTQ 375

  Fly   721 WWP 723
            |||
 Worm   376 WWP 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeobox 548..601 CDD:278475 47/52 (90%)
ceh-22NP_001343841.1 Homeobox 229..279 CDD:365835 44/49 (90%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167831
Domainoid 1 1.000 106 1.000 Domainoid score I4140
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002404
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_108087
Panther 1 1.100 - - LDO PTHR24340
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2570
SonicParanoid 1 1.000 - - X524
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.870

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