Protein Alignment vnd and ceh-23

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_498700.1
• Gene: ceh-23 / 176096
• WormBaseID: WBGene00000446
• Length: 305
• Species: Caenorhabditis elegans
• Alignment Length: 349
• Identity: 82/349 - (23%)
• Similarity: 120/349 - (34%)
• Gaps: 125/349 - (35%)

  Fly   305 HHPHLLLPQQHHQQAVAPLPLAHHQSGEA-QSHAHANAAAAHLLASHNAAAAAAVAAGQYLPNLP 368
            |.|...||      ...|||::.....:. |:.|...|.....:.|        .:.|...||||
 Worm     4 HLPFQTLP------VSTPLPVSSSSLTDVLQTIAALQACPTSCIPS--------TSTGMLSPNLP 54

  Fly   369 KN--------FPGSF-GDEMSSYHHMAQ------TMLQHSGRSAWIKENELYGT--------QQP 410
            .:        ||.|. .:.:......||      ::||.:..:.....|.|:.|        :.|
 Worm    55 FSATIPRVNLFPPSQPANSLILPTIPAQPFIPNPSLLQANPSAVEALANALFATTSRRASCPEPP 119

  Fly   411 ASPDSTSPVTSEVSYT-------YIGSNCQ-------------TS--PALSGDYKSYSRSADSDA 453
            ||..:|  ||.:|..|       |..:|.:             ||  |.:.|.|..:..:|.:..
 Worm   120 ASSQAT--VTLQVPSTGSPERRRYSETNMEVLLREQLAQLMPPTSQLPGMPGCYYQHVPAAGTSG 182

  Fly   454 LSVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIE 518
                     :.||......|..|.|          .|:..||.:|
 Worm   183 ---------IQGSLDAALMGAVPLA----------MNSMAHSRRA-------------------- 208

  Fly   519 EDIDDVDDADGSGGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIR 583
                            ||        .||.|.::...||.:||..|:.|.|:...|||:||..:.
 Worm   209 ----------------AN--------HRKARTIYGTTQTQQLEDMFKGQMYVVGAERENLAQRLG 249

  Fly   584 LTPTQVKIWFQNHRYKTKRAQNEK 607
            |:|:||:|||||.|.|.:|.|.|:
 Worm   250 LSPSQVRIWFQNRRSKHRRKQQEE 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	26/55 (47%)
ceh-23	NP_498700.1	Homeodomain	212..268	CDD:459649	26/55 (47%)