Protein Alignment vnd and mab-5

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_498695.1
• Gene: mab-5 / 176091
• WormBaseID: WBGene00003102
• Length: 200
• Species: Caenorhabditis elegans
• Alignment Length: 195
• Identity: 53/195 - (27%)
• Similarity: 83/195 - (42%)
• Gaps: 40/195 - (20%)

  Fly   436 PALSGDYKSYSRSADSDALSVGDALHTLHGSSG-NGSAGGAPTAHALHNN-------NNNTTNNN 492
            |..:||        ||.....|....:...||| :.||..:..|.|..||       |:...||.
 Worm     5 PGWTGD--------DSYWAGAGTTASSQSASSGTSASASSSAAAAAAANNLKTYELYNHTYMNNM 61

  Fly   493 NHSLKAEGINGAGSGH-------------DDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNK 544
            .|.|.|..::.:.:..             :...:...|.:.:.......|:.||::
 Worm    62 KHMLAAGWMDNSSNPFAYNPLQATSANFGETRTSMPAISQPVFPWMKMGGAKGGES--------- 117

  Fly   545 KRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR-AQNEKG 608
            ||.|:. ::::||.|||:.|...:||:...|:.::..:.||..||||||||.|.|.|: |:.|.|
 Worm   118 KRTRQT-YSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHKKEAKGEGG 181

  Fly   609  608
             Worm   182  181

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	23/55 (42%)
mab-5	NP_498695.1	Homeodomain	118..174	CDD:459649	24/56 (43%)