Protein Alignment vnd and Meox1

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: XP_036012267.1
• Gene: Meox1 / 17285
• MGIID: 103220
• Length: 271
• Species: Mus musculus
• Alignment Length: 355
• Identity: 74/355 - (20%)
• Similarity: 104/355 - (29%)
• Gaps: 133/355 - (37%)

  Fly   297 QHPHHQQ------HHHPHLLLPQQHHQQAVAPLPLAHHQSGEAQSHAHANAAAAHLLASHNAAAA 355
            ::||.:.      .|:|              |.|.:.||    :|...|.||.....||..||.
Mouse    23 RNPHSEDSSASGLSHYP--------------PTPFSFHQ----KSDFPATAAYPDFSASCLAAT- 68

  Fly   356 AAVAAGQYLPNLPKNFPGSFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQPA---SPDSTS 417
                        |.:.|                           :...::..|.||   :||...
Mouse    69 ------------PHSLP---------------------------RTERIFNEQHPAFPQTPDWHF 94

  Fly   418 PVTSEVSYTYIGSNCQTSPALSGDYKSYSRSADSDALSVGDALHTLHGSSG--NGSAGGAPTAHA 480
            |::.      .|......||                   |.|.....||.|  :|:||.......
Mouse    95 PISE------AGQRLNLGPA-------------------GSAREMGAGSPGLVDGTAGLGEDCMV 134

  Fly   481 LHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSD----GL 541
            |....|.|...::...|..      ||  .||    :.|..|:|:..:|.......|:.    ||
Mouse   135 LGTIANETEKKSSRRKKER------SG--QSL----VPEPEDEVETCEGGSACVPTGAGPRGWGL 187

  Fly   542 PNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQ----NHRYKTKR 602
            .:.. |.||..:|.|..|   |.::......|.          .||...:|..    .|..:.:.
Mouse   188 CSFS-KFRVRCSKDQNQE---RLKEPPLQFPPP----------GPTLSHLWTHPGQPAHTLRCEV 238

  Fly   603 AQNEKGYEGHPGLLHGHATHPHHPSALPSP 632
            ||    |.|......|.|..| :.||.|||
Mouse   239 AQ----YVGALNFPEGLAQRP-YISAAPSP 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	12/59 (20%)
Meox1	XP_036012267.1	None