Protein Alignment vnd and Hoxc8

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_034596.1
• Gene: Hoxc8 / 15426
• MGIID: 96198
• Length: 242
• Species: Mus musculus
• Alignment Length: 169
• Identity: 46/169 - (27%)
• Similarity: 75/169 - (44%)
• Gaps: 22/169 - (13%)

  Fly   456 VGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEED 520
            |.|..|  ||:||..::|......:|..:.:.:......:|..:.:.||       ..|..:.:.
Mouse    56 VQDFFH--HGTSGISNSGYQQNPCSLSCHGDASKFYGYEALPRQSLYGA-------QQEASVVQY 111

  Fly   521 ID-----DVDDADGSGGGDANGSDGL------PNK--KRKRRVLFTKAQTYELERRFRQQRYLSA 572
            .|     :.:.::|.|..:.|.|..|      |:.  :|..|..:::.||.|||:.|....||:.
Mouse   112 PDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTR 176

  Fly   573 PEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEG 611
            ..|..::..:.||..||||||||.|.|.|:..|:....|
Mouse   177 KRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPG 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	23/55 (42%)
Hoxc8	NP_034596.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	114..154		7/39 (18%)
		Antp-type hexapeptide	138..143		0/4 (0%)
		Homeodomain	150..206	CDD:459649	23/55 (42%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	206..242		2/10 (20%)