Protein Alignment vnd and Hoxa9

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_034586.1
• Gene: Hoxa9 / 15405
• MGIID: 96180
• Length: 271
• Species: Mus musculus
• Alignment Length: 318
• Identity: 70/318 - (22%)
• Similarity: 96/318 - (30%)
• Gaps: 144/318 - (45%)

  Fly   300 HHQQHHHPHLLLPQQHHQQAVAPLPLAHHQSGEAQSHAHANAAAAHLLASHNAAAAAAVAAGQYL 364
            ||  ||||::      |.|                                 |..|||...|:|:
Mouse    84 HH--HHHPYV------HPQ---------------------------------APVAAAAPDGRYM 107

  Fly   365 PNLPKNFPGSFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQPASPDSTSPVTSEVSYTYIG 429
            .:..:..||:               |..:|    :..:..||.:    |:..|
Mouse   108 RSWLEPTPGA---------------LSFAG----LPSSRPYGIK----PEPLS------------ 137

  Fly   430 SNCQTSPALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNH 494
                            :|..|...|..    |||   |....|.|:|........:....:.||
Mouse   138 ----------------ARRGDCPTLDT----HTL---SLTDYACGSPPVDREKQPSEGAFSENN- 178

  Fly   495 SLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPN----------KKRKRR 549
                                            |:...|||....|  ||          ..||:|
Mouse   179 --------------------------------AENESGGDKPPID--PNNPAANWLHARSTRKKR 209

  Fly   550 VLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEK 607
            ..:||.||.|||:.|....||:...|..:|.|:.||..||||||||.|.|.|:...::
Mouse   210 CPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMKKINKDR 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	28/55 (51%)
Hoxa9	NP_034586.1	Hox9_act	1..192	CDD:461369	39/241 (16%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	154..197		12/77 (16%)
		Homeodomain	206..262	CDD:459649	28/55 (51%)