Protein Alignment vnd and gbx1

DIOPT Version :10

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: NP_777286.1
• Gene: gbx1 / 142985
• ZFINID: ZDB-GENE-020117-2
• Length: 316
• Species: Danio rerio
• Alignment Length: 330
• Identity: 82/330 - (24%)
• Similarity: 122/330 - (36%)
• Gaps: 78/330 - (23%)

  Fly   296 QQHPHHQQHHHPHLLLPQQHHQQAVAPLPLAHHQSGEAQSHAHANAAAAHL--LASHNAAAAAAV 358
            |..|.|..:....:.:|.:       ||.:.     :|.||:...:....|  |||.........
Zfish    21 QPRPGHLLYTGYPMFMPYR-------PLMIP-----QALSHSSLPSGIPPLAPLASFAGRLTNTF 73

  Fly   359 AA--GQYLPN---LPKNFPGSFGDEMSSYH---HMAQTMLQHSGRSAWIKENELYGTQQPASPDS 415
            .|  ||.:|:   |....| ||.|...|::   .|....|...|.          |..:..||..
Zfish    74 CAGLGQGMPSMVALTTTLP-SFSDPPDSFYPPQEMPGPRLGADGT----------GMNRQESPHD 127

  Fly   416 TSPVTSEVSYTYIGSNCQTSPALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAPTAHA 480
            ....:..:::|      :|..|::|:.|.||...:...|...:|                    |
Zfish   128 ELKGSELLNFT------ETFQAVAGETKLYSSDDEKLDLKAAEA--------------------A 166

  Fly   481 LHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKK 545
            ..:..:::.::.|.|. ::|...|.:.....|.                .|..||....|...|.
Zfish   167 CSDREDSSADSENESF-SDGNTCASASQKGKLK----------------GGSQDALPPGGSAGKS 214

  Fly   546 RKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR--AQNEKG 608
            |:||..||..|..|||:.|..::|||..||..:|..::|:..||||||||.|.|.||  |.|...
Zfish   215 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRIKAGNVNN 279

  Fly   609 YEGHP 613
            ..|.|
Zfish   280 RSGEP 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	27/55 (49%)
gbx1	NP_777286.1	Homeodomain	215..271	CDD:459649	27/55 (49%)