DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and Dlx4

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_031893.3 Gene:Dlx4 / 13394 MGIID:94904 Length:240 Species:Mus musculus


Alignment Length:126 Identity:47/126 - (37%)
Similarity:64/126 - (50%) Gaps:23/126 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   541 LPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR--- 602
            |..|.||.|.:::..|...|.:||:..:||:.|||..||:.:.||.|||||||||.|.|.|:   
Mouse   112 LTRKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLK 176

  Fly   603 ---AQNEKGYEGHPGLLHGHATHPHHPSALP----SPRRVAVPVLVRNGKPCLGDSSKLGA 656
               .:.|:.:.|.|..|     .||.| |||    .|:...:|   .:|.    |:|..||
Mouse   177 QSSGEPEEDFSGRPPSL-----SPHSP-ALPFIWGLPKADTLP---SSGY----DNSHFGA 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 27/55 (49%)
Dlx4NP_031893.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..70
Homeodomain 117..173 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..194 4/23 (17%)
Blue background indicates that the domain is not in the aligned region.

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