DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and Dlx1

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:NP_034183.1 Gene:Dlx1 / 13390 MGIID:94901 Length:255 Species:Mus musculus


Alignment Length:276 Identity:78/276 - (28%)
Similarity:121/276 - (43%) Gaps:50/276 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   413 PDS-TSPVTSEVSYTYIG-SNCQTSPA--LSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAG 473
            |:| .|||:.:..:...| .|.|.||:  ..|.|                ::|.|| |:|:....
Mouse     7 PESLNSPVSGKAVFMEFGPPNQQMSPSPMSHGHY----------------SMHCLH-SAGHSQPD 54

  Fly   474 GAPTAHALHN--------NNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGS 530
            ||.::.:..:        |:.::..::.:....:...|:.|.....|.:.|.:.:...|.:    
Mouse    55 GAYSSASSFSRPLGYPYVNSVSSHASSPYISSVQSYPGSASLAQSRLEDPGADSEKSTVVE---- 115

  Fly   531 GGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQN 595
             ||:.. .:|...|.||.|.:::..|...|.|||:|.:||:.|||..||:.:.||.|||||||||
Mouse   116 -GGEVR-FNGKGKKIRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQN 178

  Fly   596 HRYKTKRAQNEKG--YEGHPGLLHGHATHPHHPSALP--SPRRVAVPVLVRNGKPCLGDSSKLGA 656
            .|.|.|:...:.|  .|| ..|.:|.|.....|...|  :|..       .:||   |..|..|:
Mouse   179 KRSKFKKLMKQGGAALEG-SALANGRALSAGSPPVPPGWNPNS-------SSGK---GSGSSAGS 232

  Fly   657 DCVSVSSATATAMQNA 672
            ...|.:|...:|.|.|
Mouse   233 YVPSYTSWYPSAHQEA 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 29/55 (53%)
Dlx1NP_034183.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 10/30 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..118 5/27 (19%)
Homeodomain 129..185 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..233 9/38 (24%)

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