DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vnd and LOC1272724

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:XP_311623.3 Gene:LOC1272724 / 1272724 VectorBaseID:AGAMI1_000064 Length:327 Species:Anopheles gambiae


Alignment Length:313 Identity:86/313 - (27%)
Similarity:125/313 - (39%) Gaps:76/313 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 HAHANAAAAHLLAS----HNAAAAAAVAAGQYLPNLPKNFPGSFGDEMSSY--HHMAQT-MLQHS 393
            :.|.:.|||.::.:    |:...|||.||  |     :.||.|.|  ||.|  ||:.|| ..|.|
Mosquito    11 YGHPHQAAAGMMTTTGTHHDQTTAAAAAA--Y-----RGFPLSLG--MSPYTNHHLHQTRTAQES 66

  Fly   394 GRSAWIKE--NELY---------GTQQPASPDST-------------SPVTSEVSYTYIGSNCQT 434
            ...|.|:.  .::|         ||:..:..:.|             |..|:..:....|||.  
Mosquito    67 PYDASIQAACKQIYEGSYSSKDCGTKGTSGNNGTDTSNGYKDVWNANSGATNGATTGATGSNV-- 129

  Fly   435 SPALSGDYKSYSRSADSDALSVGDALHTLHGS--SGNGSAGGAPTAHALHNNN--NNTTNNNNHS 495
             ||..........||.:....||..:....||  |..|||..|.......|.|  :.|.:....:
Mosquito   130 -PAQQNSSVPVRPSACTPDSRVGGYIDASGGSPVSRAGSAAAAAGVPGSWNTNQCSLTGSTGGQA 193

  Fly   496 LKAEGING-----------AGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKKRKRR 549
            ..:.|::.           ||..:.:||               .|:...|..|::||   :|:.|
Mosquito   194 APSTGLHQSNHTFYPWMAIAGKRYSESL---------------AGTLLPDWIGANGL---RRRGR 240

  Fly   550 VLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKR 602
            ..:|:.||.|||:.|....||:...|..:|..:.||..|:||||||.|.|.|:
Mosquito   241 QTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 24/55 (44%)
LOC1272724XP_311623.3 None

Return to query results.
Submit another query.