DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and slou

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:XP_061507570.1 Gene:slou / 1271755 VectorBaseID:AGAMI1_009597 Length:731 Species:Anopheles gambiae


Alignment Length:745 Identity:187/745 - (25%)
Similarity:232/745 - (31%) Gaps:292/745 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 STASTTVPTNTSSSSGLAPEQLRIPTGAAAFSGF--PGLHSMSSLMLPS----SAAVAAAAAAPF 155
            :|.||| || :||.....|.:|.:..|...|...  ...||.||....|    ....||......
Mosquito    51 ATTSTT-PT-SSSQEASEPGELLVRGGGGTFLDLRANSSHSNSSNSTDSEPLDGEQEAADGGCDT 113

  Fly   156 LPWSPILLPPWNHALLPAAFYPAALRNALPGLFDAKVPSSQRSGFHISDILNLEGSELKNAAAAA 220
            ....|...|      ...|:.||..::..|       |.|  :|...|...::|  .||:.|...
Mosquito   114 FADQPGADP------RQGAYSPADTQHTQP-------PPS--TGPDRSVKFSIE--RLKHLADGH 161

  Fly   221 AAAAHHGSDLSHH-SASESTSGHRGQGSHTSP--SALSPTPAGVSADEHHNGSGTGGGAGEADHH 282
            ..|..|...|.|| ||:|...  ...|.|..|  ||..|...|||.        ...||      
Mosquito   162 GLAVRHHHPLHHHQSAAEQLV--LAAGGHFPPPGSAHPPVGPGVSV--------IPSGA------ 210

  Fly   283 STTEHHAPPSHPQQQHPHHQQH--HH--------------------------PHLLLPQQH---H 316
                 ..||.||...||.|..|  ||                          ||   |.||   |
Mosquito   211 -----VLPPLHPAVLHPVHPAHPAHHTPVAAGVAPLQPSSCFPHASATAAAPPH---PHQHSHGH 267

  Fly   317 QQAVAPLPLAHHQSGEAQSHAHANAAAAHLLASHNAAAAAAVAAGQYLPNLPKNFPGSFGDEMSS 381
            |:        |||:..|.:.|.|.||||       ||||||||:|.                   
Mosquito   268 QR--------HHQAAIAAATAAAAAAAA-------AAAAAAVASGS------------------- 298

  Fly   382 YHHMAQTMLQHSGRSAWIKENELYGTQQPASP---------------DSTSPVTSEV-------- 423
             :|.||...||...|.........| |.|..|               .|.||...|:        
Mosquito   299 -NHPAQPHQQHQQASPHDPTASPPG-QPPPPPVLHPGGHPFAIKYPAGSASPTDLEIERFKIART 361

  Fly   424 ---------------SYTYIGSNCQTSPALSGDYKSYSRSADSDALSV----------------- 456
                           ..:.||...|........:..|:||..|:.|.|                 
Mosquito   362 AINSTAAFAAAAAAKELSDIGFRIQLQDGAGQHHGGYARSDTSEELIVDGNEESSQDGISGCPVD 426

  Fly   457 --------GDA---------------------------------LHTLHGSSG------------ 468
                    ||.                                 .|...|..|            
Mosquito   427 LTRSMDNGGDTKPHAIRDTDKEAASKRLAFSVENILDPNKFNGKQHCASGGGGGGAVTPISGGIF 491

  Fly   469 --------------NGSAGGAPTAH----ALHNNNNNTTNNN--NHSLKAE-GINGAGSGHDDSL 512
                          ||:|||....:    .::|||||..|||  ||:..|: .....|...||.|
Mosquito   492 GPKLNGTKLGGPALNGAAGGNYATNNNNCTVNNNNNNNNNNNSINHNNNAKFWSQSGGLERDDKL 556

  Fly   513 NEDGIE----EDIDDVDD----------------------ADGSGGGDANG-SDGLPNKKRKRRV 550
            ::|..:    :|::|:|.                      .|||.....:| |.|..:|.|:.|.
Mosquito   557 DDDHSDSRSVKDVNDIDQDDMGDDTMGSDMDDHASETDSKKDGSNNRSGDGKSQGNSSKPRRART 621

  Fly   551 LFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQ----------- 604
            .||..|...||.:|:..||||..||.:||..:.||.|||||||||.|.|.|:..           
Mosquito   622 AFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDVNSPTVP 686

  Fly   605 --NEKGYEGHPGLLHGHATHPHHPSALPSP 632
              |..|..| ||.......:||   |:|.|
Mosquito   687 PPNSGGSFG-PGSYASSLLYPH---AMPYP 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 29/55 (53%)
slouXP_061507570.1 None

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