Protein Alignment vnd and nkx2-4

DIOPT Version :9

• Sequence 1: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Sequence 2: XP_002939478.1
• Gene: nkx2-4 / 100495653
• XenbaseID: XB-GENE-487481
• Length: 343
• Species: Xenopus tropicalis
• Alignment Length: 320
• Identity: 109/320 - (34%)
• Similarity: 147/320 - (45%)
• Gaps: 70/320 - (21%)

  Fly   373 GSFGDEMSSYH--HMAQT-MLQHS-GRSAWIKENELYGTQQPASPDSTSPVTSEVSYTYIGSNCQ 433
            |:....:.:|.  |::|| |.||| |.:|.:       |.....|.|    .|:.|:..:|..|.
 Frog    34 GNLSSPLGAYRQTHVSQTGMQQHSMGHNATV-------TTTYHMPHS----VSQFSHGAMGGYCN 87

  Fly   434 TSPALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGAPTAHALHNNNNNTTNNNNHSLKA 498
            ......||..||..:..:.|.:.|     .:|:                |.:...:..:.....:
 Frog    88 GGIGNMGDIPSYQDTMRNSAAATG-----WYGA----------------NTDPRYSTISRFMGPS 131

  Fly   499 EGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDGLPNKKRKRRVLFTKAQTYELERR 563
            .|:|.||.|     ...||.|....:.....:             .:|||||||::||.||||||
 Frog   132 TGMNMAGMG-----TLQGIAEAAKSMAPLHAA-------------PRRKRRVLFSQAQVYELERR 178

  Fly   564 FRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEGHPGLLHGHATHPHHPSA 628
            |:||:||||||||||||:|.||||||||||||||||.||...:|        :........:...
 Frog   179 FKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDK--------VTQQLQQESNLCQ 235

  Fly   629 LPSPRRVAVPVLVRNGKPCLGDSSKLGADCVSVSSATATAMQNAAAHHLVALNGAAAYQH 688
            ..|||||||||||::||||...|:      .|..:...|..|:.|...|.:.|  |.:||
 Frog   236 QQSPRRVAVPVLVKDGKPCQNSSN------TSTPNQQVTQQQSGATGGLSSSN--AVHQH 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vnd	NP_476786.2	Homeobox	548..601	CDD:278475	45/52 (87%)
nkx2-4	XP_002939478.1	Homeobox	163..217	CDD:365835	45/53 (85%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X524
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000