DRSC/TRiP Functional Genomics Resources

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Protein Alignment vnd and ventx2.2

DIOPT Version :10

Sequence 1:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster
Sequence 2:XP_002937178.3 Gene:ventx2.2 / 100494704 XenbaseID:XB-GENE-920515 Length:333 Species:Xenopus tropicalis


Alignment Length:314 Identity:81/314 - (25%)
Similarity:112/314 - (35%) Gaps:89/314 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 GSFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQ------PASP---DSTSPVTSEVSYTYI 428
            |......||...:||:    |.||.  ||....|.|:      |:.|   ...||.:.....:.:
 Frog     8 GKMTKAFSSVEWLAQS----SRRSH--KEQPSKGDQRYSPYPSPSLPSWNSDVSPSSWNSQLSPV 66

  Fly   429 GSNCQTSPAL-SGDYKSYSRSA-----DSDALSVGDALHT---------LHGSSGNGSAGGAPTA 478
            ..:.|.||.. |..|.|.|.|:     |.|.....| |:|         ||..:......|..:.
 Frog    67 AGSAQVSPCPGSAQYSSDSESSLYSNEDEDLFCEKD-LNTPSTPGDNGLLHKDTATHDYSGMVSV 130

  Fly   479 HALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDI------------------DDVD 525
            .|   |...||:|.         :.|.||:..| .:.|.|.:.                  :|..
 Frog   131 PA---NTPRTTSNE---------DAAKSGYSTS-TDSGYESEASRSSSTAPEGDATVSLSPNDTS 182

  Fly   526 DADGSGGGDANGSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVK 590
            |.:|..|             |:.|..||..|...||:.|::.|||.|.||..||:.::|:..|:|
 Frog   183 DEEGKLG-------------RRLRTAFTSDQISTLEKTFQKHRYLGASERRKLAAKLQLSEVQIK 234

  Fly   591 IWFQNHRYKTKRAQNE--------------KGYEGHPGLLHGHATHPHHPSALP 630
            .||||.|.|.||...:              .||...|..:..||....:|...|
 Frog   235 TWFQNRRMKYKREIQDGRPDSYHPAQFFGVYGYSQQPTPVFQHAVQQPYPGYSP 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vndNP_476786.2 Homeodomain 546..602 CDD:459649 25/55 (45%)
ventx2.2XP_002937178.3 Homeodomain 190..246 CDD:459649 25/55 (45%)

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